Search results for "Ion Channel Gating"

showing 10 items of 23 documents

Modulation of voltage-gated Na+ and K+ channels by pumiliotoxin 251D: A “joint venture” alkaloid from arthropods and amphibians

2008

Abstract Certain amphibians provide themselves with a chemical defense by accumulating lipophilic alkaloids into skin glands from dietary arthropods. Examples of such alkaloids are pumiliotoxins (PTXs). In general, PTXs are known as positive modulators of voltage-gated sodium channels (VGSCs). Unlike other PTXs, PTX 251D does not share this characteristic. However, mice and insect studies showed that PTX 251D is highly toxic and to date the basis of its toxicity remains unknown. In this work, we searched for the possible target of PTX 251D . The toxin was therefore made synthetically and tested on four VGSCs (mammalian rNa v 1.2/β 1 , rNa v 1.4/β 1 , hNa v 1.5/β 1 and insect Para/tipE ) and…

Voltage clamphERGXenopusGene ExpressionToxicologySodium ChannelsAmphibiansXenopus laevischemistry.chemical_compoundAnimalsArthropodsIon channelDose-Response Relationship DrugMolecular StructurebiologyVoltage-gated ion channelSodium channelIndolizinesPumiliotoxin 251Dbiology.organism_classificationPotassium channelBiochemistrychemistryPotassium Channels Voltage-GatedOocytesbiology.proteinIon Channel GatingSodium Channel BlockersToxicon
researchProduct

Ion transport and selectivity in nanopores with spatially inhomogeneous fixed charge distributions

2007

Polymeric nanopores with fixed charges show ionic selectivity when immersed in aqueous electrolyte solutions. The understanding of the electrical interaction between these charges and the mobile ions confined in the inside nanopore solution is the key issue in the design of potential applications. The authors have theoretically described the effects that spatially inhomogeneous fixed charge distributions exert on the ionic transport and selectivity properties of the nanopore. A comprehensive set of one-dimensional distributions including the skin, core, cluster, and asymmetric cases are analyzed on the basis of the Nernst-Planck equations. Current-voltage curves, nanopore potentials, and tr…

Models MolecularMaterials scienceStatic ElectricityGeneral Physics and AstronomyIonic bondingNanotechnologyElectrolyteIon ChannelsNanoporous materialsIonQuantitative Biology::Subcellular ProcessesElectrolytesBiopolymersIonic conductivityStatic electricityCluster (physics)Ionic conductivityComputer SimulationPhysical and Theoretical Chemistry:FÍSICA::Química física [UNESCO]AnisotropyIon TransportUNESCO::FÍSICA::Química físicaNanostructuresNanoporeModels ChemicalPolymer solutionsChemical physicsNanoporous materials ; Polymer solutions ; Electrolytes ; Ionic conductivityAnisotropyIon Channel GatingPorosityThe Journal of Chemical Physics
researchProduct

L-type calcium channel activity in human atrial myocytes as influenced by 5-HT.

1993

5-Hydroxytryptamine (10 mumol/l; 5-HT) exerted a positive inotropic effect associated with an increase in the Ca2+ current (ICa) in the human right atrium. For detailed analysis, L-type Ca2+ channel currents were recorded from cell-attached patches using 100 mmol/l Ba2+ as charge carrier. Ca2+ channel activity was identified, first, by burst-like inwardly directed currents and, second, by the appearance of long channel openings promoted by Bay K 8644 (1 mumol/l) upon repetitive depolarizations from -80 to 0 mV. The unitary conductance of the Ca2+ channel amounted to 25.8 pS. During superfusion with 5-HT, ensemble averaged (mean) current was enhanced by about 60%. The increase in mean curren…

MaleSerotoninchemistry.chemical_elementAction PotentialsGatingCalciumIn Vitro TechniquesMoleCyclic AMPHumansL-type calcium channelPhosphorylation5-HT receptorAgedPharmacologyMyocardiumIsoproterenolInfantDepolarizationHeartGeneral MedicineAnatomy3-Pyridinecarboxylic acid 14-dihydro-26-dimethyl-5-nitro-4-(2-(trifluoromethyl)phenyl)- Methyl esterMiddle AgedMyocardial ContractionElectrophysiologyElectrophysiologyKineticschemistryChild PreschoolBiophysicsFemaleCalcium ChannelsIon Channel GatingCommunication channelNaunyn-Schmiedeberg's archives of pharmacology
researchProduct

Murine muscle engineered from dermal precursors: an in vitro model for skeletal muscle generation, degeneration and fatty infiltration.

2013

Skeletal muscle can be engineered by converting dermal precursors into muscle progenitors and differentiated myocytes. However, the efficiency of muscle development remains relatively low and it is currently unclear if this is due to poor characterization of the myogenic precursors, the protocols used for cell differentiation, or a combination of both. In this study, we characterized myogenic precursors present in murine dermospheres, and evaluated mature myotubes grown in a novel three-dimensional culture system. After 5-7 days of differentiation, we observed isolated, twitching myotubes followed by spontaneous contractions of the entire tissue-engineered muscle construct on an extracellul…

Cellular differentiationSarcoplasmMuscle Fibers SkeletalBiomedical EngineeringMedicine (miscellaneous)BioengineeringBiologyMuscle DevelopmentModels BiologicalArticleExtracellular matrixMiceTissue engineeringSpheroids CellularmedicineMyocyteAnimalsCell ProliferationTissue EngineeringMyogenesisCell growthMusclesSkeletal muscleCell DifferentiationDermisLipidsAcetylcholineBiologia experimentalCell biologyExtracellular Matrixmedicine.anatomical_structureBiochemistryGene Expression RegulationFemaleEnginyeria biomèdicaIon Channel GatingBiomarkers
researchProduct

Nicotinic receptor function in the mammalian central nervous system.

1995

The diversity of neuronal nicotinic receptors (nAChRs) in addition to their possible involvement in such pathological conditions as Alzheimer's disease have directed our research towards the characterization of these receptors in various mammalian brain areas. Our studies have relied on electrophysiological, biochemical, and immunofluorescent techniques applied to cultured and acutely dissociated hippocampal neurons, and have been aimed at identifying the various subtypes of nAChRs expressed in the mammalian central nervous system (CNS), at defining the mechanisms by which CNS nAChR activity is modulated, and at determining the ion permeability of CNS nAChR channels. Our findings can be sum…

Central nervous systemHippocampal formationNeurotransmissionIn Vitro TechniquesReceptors NicotinicLigandsHippocampusSynaptic TransmissionGeneral Biochemistry Genetics and Molecular BiologyStructure-Activity RelationshipHistory and Philosophy of SciencemedicineAnimalsMagnesiumPhosphorylationReceptorCells CulturedMammalsMolecular StructureChemistryGeneral NeuroscienceAcetylcholineOlfactory bulbElectrophysiologyNicotinic agonistmedicine.anatomical_structurenervous systemCalciumSignal transductionNeuroscienceIon Channel GatingSignal TransductionAnnals of the New York Academy of Sciences
researchProduct

Ion conduction in the KcsA potassium channel analyzed with a minimal kinetic model.

2004

We use a model by Nelson to study the current-voltage and conductance-concentration curves of bacterial potassium channel KcsA without assuming rapid ion translocation. Ion association to the channel filter is rate controlling at low concentrations, but dissociation and transport in the filter can limit conduction at high concentration for ions other than ${\mathrm{K}}^{+}$. The absolute values of the effective rate constants are tentative but the relative changes in these constants needed to qualitatively explain the experiments should be of significance.

Materials scienceIon TransportPotassium ChannelsCell MembraneKcsA potassium channelElectric ConductivityThermodynamicsIon-associationThermal conductionModels BiologicalPotassium channelDissociation (chemistry)IonMembrane PotentialsKineticsReaction rate constantBacterial ProteinsModels ChemicalPotassiumPhysical chemistryComputer SimulationIon Channel GatingIon channelPhysical review. E, Statistical, nonlinear, and soft matter physics
researchProduct

Human T cells in silico: Modelling their electrophysiological behaviour in health and disease

2016

Although various types of ion channels are known to have an impact on human T cell effector functions, their exact mechanisms of influence are still poorly understood. The patch clamp technique is a well-established method for the investigation of ion channels in neurons and T cells. However, small cell sizes and limited selectivity of pharmacological blockers restrict the value of this experimental approach. Building a realistic T cell computer model therefore can help to overcome these kinds of limitations as well as reduce the overall experimental effort. The computer model introduced here was fed off ion channel parameters from literature and new experimental data. It is capable of simu…

CD4-Positive T-Lymphocytes0301 basic medicineStatistics and ProbabilityT-LymphocytesT cellIn silicoElectrophysiological PhenomenaBiologyModels BiologicalIon ChannelsGeneral Biochemistry Genetics and Molecular BiologyMembrane Potentials03 medical and health sciences0302 clinical medicineTRPM7CationsmedicineHumansComputer SimulationDiseasePatch clampIon channelMembrane potentialGeneral Immunology and MicrobiologyApplied MathematicsGeneral MedicineHydrogen-Ion ConcentrationElectrophysiological PhenomenaElectrophysiology030104 developmental biologymedicine.anatomical_structureSpinal CordHealthModeling and SimulationImmunologyPotassiumCalciumGeneral Agricultural and Biological SciencesIon Channel GatingNeuroscience030217 neurology & neurosurgeryJournal of Theoretical Biology
researchProduct

Permeating disciplines: Overcoming barriers between molecular simulations and classical structure-function approaches in biological ion transport

2017

Ion translocation across biological barriers is a fundamental requirement for life. In many cases, controlling this process-for example with neuroactive drugs-demands an understanding of rapid and reversible structural changes in membrane-embedded proteins, including ion channels and transporters. Classical approaches to electrophysiology and structural biology have provided valuable insights into several such proteins over macroscopic, often discontinuous scales of space and time. Integrating these observations into meaningful mechanistic models now relies increasingly on computational methods, particularly molecular dynamics simulations, while surfacing important challenges in data manage…

0301 basic medicineProtein ConformationComputer sciencemedia_common.quotation_subjectData managementBiophysicsContext (language use)Molecular Dynamics SimulationBiochemistryIon ChannelsArticleStructure-Activity Relationship03 medical and health sciencesAnimalsHumansFunction (engineering)Biological sciencesClassical structureIon transportermedia_commonIon Transportbusiness.industryMembrane Transport ProteinsCell BiologyData science030104 developmental biologyStructural biologybusinessIon Channel GatingProtein BindingBiochimica et Biophysica Acta (BBA) - Biomembranes
researchProduct

Single mechano-gated channels activated by mechanical deformation of acutely isolated cardiac fibroblasts from rats

2010

Aim Mechanosensitive conductances were reported in cardiac fibroblasts, but the properties of single channels mediating their mechanosensitivity remain uncharacterized. The aim of this work was to investigate single mechano-gated channels (MGCs) activated by mechanical deformations of cardiac fibroblasts. Methods Currents through single MGCs and mechanosensitive whole-cell currents were recorded from isolated rat atrial fibroblasts using the cell-attached and whole-cell patch-clamp configurations respectively. Defined mechanical stress was applied via the patch pipette used for the whole-cell recordings. Results Under resting conditions occasional short openings of two types of single MGCs …

MaleCytochalasin DPatch-Clamp TechniquesPhysiologyCell SeparationIon Channelschemistry.chemical_compoundPressureAnimalsMyocyteMyocytes CardiacHeart AtriaPatch clampReversal potentialCell ShapeNucleic Acid Synthesis InhibitorsCytochalasin DPipetteAnatomyFibroblastsElectric StimulationRatsElectrophysiologySolutionsCoupling (electronics)ElectrophysiologychemistryBiophysicsMechanosensitive channelsColchicineIon Channel GatingActa Physiologica
researchProduct

Regulation of Calcium Channel Activity by Lipid Domain Formation in Planar Lipid Bilayers

2003

The sarcoplasmic reticulum channel (ryanodine receptor) from cardiac myocytes was reconstituted into planar lipid bilayers consisting of 1-palmitoyl-2-oleoyl-phosphatidylethanolamine (POPE) and 1-palmitoyl-2-oleoyl-phosphatidylcholine (POPC) in varying ratios. The channel activity parameters, i.e., open probability and average open time and its resolved short and long components, were determined as a function of POPE mole fraction (X(PE)) at 22.4 degrees C. Interestingly, all of these parameters exhibited a narrow and pronounced peak at X(PE) approximately 0.80. Differential scanning calorimetric measurements on POPE/POPC liposomes with increasing X(PE) indicated that the lipid bilayer ente…

Membrane FluidityProtein ConformationLipid BilayersBiophysicsAnalytical chemistryMolecular Conformation010402 general chemistryElectric Capacitance01 natural sciencesMembrane Potentials03 medical and health scienceschemistry.chemical_compoundStructure-Activity RelationshipProtein structureMembrane MicrodomainsChannels Receptors and TransportersMembrane fluidityLipid bilayer phase behaviorLipid bilayerPOPC030304 developmental biologyMembrane potential0303 health sciencesLiposomeEndoplasmic reticulumPhosphatidylethanolaminesMembranes ArtificialRyanodine Receptor Calcium Release Channel0104 chemical scienceschemistry13. Climate actionBiophysicsPhosphatidylcholineslipids (amino acids peptides and proteins)Calcium ChannelsIon Channel Gating
researchProduct